Lineage for Species: Methanopyrus kandleri [TaxId: 2320]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1998807Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 1998844Family a.60.2.4: Topoisomerase V repeat domain [140626] (1 protein)
  6. 1998845Protein Topoisomerase V [140627] (1 species)
  7. 1998846Species Methanopyrus kandleri [TaxId:2320] [140628] (2 PDB entries)
    Uniprot Q977W1 294-350! Uniprot Q977W1 351-409! Uniprot Q977W1 410-464! Uniprot Q977W1 465-519

PDB entries in Species: Methanopyrus kandleri [TaxId: 2320]:

  1. Domain(s) for 2csb:
    1. 1998847Domain d2csba1: 2csb A:351-409 [130751]
      Other proteins in same PDB: d2csba5, d2csbb1
      2nd repeat
      complexed with mg
    2. 1998848Domain d2csba2: 2csb A:294-350 [130752]
      Other proteins in same PDB: d2csba5, d2csbb1
      1st repeat
      complexed with mg
    3. 1998849Domain d2csba3: 2csb A:410-464 [130753]
      Other proteins in same PDB: d2csba5, d2csbb1
      3rd repeat
      complexed with mg
    4. 1998850Domain d2csba4: 2csb A:465-519 [130754]
      Other proteins in same PDB: d2csba5, d2csbb1
      4th repeat
      complexed with mg
    5. 1998851Domain d2csbb2: 2csb B:294-350 [197841]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba2
      complexed with mg
    6. 1998852Domain d2csbb3: 2csb B:351-409 [197842]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba1
      complexed with mg
    7. 1998853Domain d2csbb4: 2csb B:410-464 [197843]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba3
      complexed with mg
    8. 1998854Domain d2csbb5: 2csb B:465-519 [197844]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba4
      complexed with mg
  2. Domain(s) for 2csd:
    1. 1998855Domain d2csda2: 2csd A:294-350 [203823]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba2
    2. 1998856Domain d2csda3: 2csd A:351-409 [203824]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba1
    3. 1998857Domain d2csda4: 2csd A:410-464 [203825]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba3
    4. 1998858Domain d2csda5: 2csd A:465-518 [203826]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba4
    5. 1998859Domain d2csdb2: 2csd B:294-350 [203828]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba2
    6. 1998860Domain d2csdb3: 2csd B:351-409 [203829]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba1
    7. 1998861Domain d2csdb4: 2csd B:410-464 [203830]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba3
    8. 1998862Domain d2csdb5: 2csd B:465-518 [203831]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba4

More info for Species Methanopyrus kandleri [TaxId:2320] from a.60.2.4 Topoisomerase V

Timeline for Species Methanopyrus kandleri [TaxId:2320] from a.60.2.4 Topoisomerase V: