Lineage for Species: Methanopyrus kandleri [TaxId: 2320]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2324209Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 2324407Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 2324444Family a.60.2.4: Topoisomerase V repeat domain [140626] (1 protein)
  6. 2324445Protein Topoisomerase V [140627] (1 species)
  7. 2324446Species Methanopyrus kandleri [TaxId:2320] [140628] (2 PDB entries)
    Uniprot Q977W1 294-350! Uniprot Q977W1 351-409! Uniprot Q977W1 410-464! Uniprot Q977W1 465-519

PDB entries in Species: Methanopyrus kandleri [TaxId: 2320]:

  1. Domain(s) for 2csb:
    1. 2324447Domain d2csba1: 2csb A:351-409 [130751]
      Other proteins in same PDB: d2csba5, d2csbb1
      2nd repeat
      complexed with mg
    2. 2324448Domain d2csba2: 2csb A:294-350 [130752]
      Other proteins in same PDB: d2csba5, d2csbb1
      1st repeat
      complexed with mg
    3. 2324449Domain d2csba3: 2csb A:410-464 [130753]
      Other proteins in same PDB: d2csba5, d2csbb1
      3rd repeat
      complexed with mg
    4. 2324450Domain d2csba4: 2csb A:465-519 [130754]
      Other proteins in same PDB: d2csba5, d2csbb1
      4th repeat
      complexed with mg
    5. 2324451Domain d2csbb2: 2csb B:294-350 [197841]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba2
      complexed with mg
    6. 2324452Domain d2csbb3: 2csb B:351-409 [197842]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba1
      complexed with mg
    7. 2324453Domain d2csbb4: 2csb B:410-464 [197843]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba3
      complexed with mg
    8. 2324454Domain d2csbb5: 2csb B:465-519 [197844]
      Other proteins in same PDB: d2csba5, d2csbb1
      automated match to d2csba4
      complexed with mg
  2. Domain(s) for 2csd:
    1. 2324455Domain d2csda2: 2csd A:294-350 [203823]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba2
    2. 2324456Domain d2csda3: 2csd A:351-409 [203824]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba1
    3. 2324457Domain d2csda4: 2csd A:410-464 [203825]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba3
    4. 2324458Domain d2csda5: 2csd A:465-518 [203826]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba4
    5. 2324459Domain d2csdb2: 2csd B:294-350 [203828]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba2
    6. 2324460Domain d2csdb3: 2csd B:351-409 [203829]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba1
    7. 2324461Domain d2csdb4: 2csd B:410-464 [203830]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba3
    8. 2324462Domain d2csdb5: 2csd B:465-518 [203831]
      Other proteins in same PDB: d2csda1, d2csdb1
      automated match to d2csba4

More info for Species Methanopyrus kandleri [TaxId:2320] from a.60.2.4 Topoisomerase V

Timeline for Species Methanopyrus kandleri [TaxId:2320] from a.60.2.4 Topoisomerase V: