SCOPe 2.08: Protein: Topoisomerase V

Lineage for Protein: Topoisomerase V

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.60: SAM domain-like [47768] (17 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.2: RuvA domain 2-like [47781] (7 families)
duplication: contains two helix-hairpin-helix (HhH) motifs
Family a.60.2.4: Topoisomerase V repeat domain [140626] (1 protein)
this is a repeat family; one repeat unit is 2csb A:351-409 found in domain
Protein Topoisomerase V [140627] (1 species)

Species:

Methanopyrus kandleri [TaxId:2320] [140628] (2 PDB entries)
Uniprot Q977W1 294-350! Uniprot Q977W1 351-409! Uniprot Q977W1 410-464! Uniprot Q977W1 465-519
1. Domains for 2csb:
  1. Domain d2csba1: 2csb A:351-409 [130751]
    Other proteins in same PDB: d2csba5, d2csbb1
    2nd repeat
    complexed with mg
  2. Domain d2csba2: 2csb A:294-350 [130752]
    Other proteins in same PDB: d2csba5, d2csbb1
    1st repeat
    complexed with mg
  3. Domain d2csba3: 2csb A:410-464 [130753]
    Other proteins in same PDB: d2csba5, d2csbb1
    3rd repeat
    complexed with mg
  4. Domain d2csba4: 2csb A:465-519 [130754]
    Other proteins in same PDB: d2csba5, d2csbb1
    4th repeat
    complexed with mg
  5. Domain d2csbb2: 2csb B:294-350 [197841]
    Other proteins in same PDB: d2csba5, d2csbb1
    automated match to d2csba2
    complexed with mg
  6. Domain d2csbb3: 2csb B:351-409 [197842]
    Other proteins in same PDB: d2csba5, d2csbb1
    automated match to d2csba1
    complexed with mg
  7. Domain d2csbb4: 2csb B:410-464 [197843]
    Other proteins in same PDB: d2csba5, d2csbb1
    automated match to d2csba3
    complexed with mg
  8. Domain d2csbb5: 2csb B:465-519 [197844]
    Other proteins in same PDB: d2csba5, d2csbb1
    automated match to d2csba4
    complexed with mg
2. Domains for 2csd:
  1. Domain d2csda2: 2csd A:294-350 [203823]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba2
  2. Domain d2csda3: 2csd A:351-409 [203824]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba1
  3. Domain d2csda4: 2csd A:410-464 [203825]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba3
  4. Domain d2csda5: 2csd A:465-518 [203826]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba4
  5. Domain d2csdb2: 2csd B:294-350 [203828]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba2
  6. Domain d2csdb3: 2csd B:351-409 [203829]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba1
  7. Domain d2csdb4: 2csd B:410-464 [203830]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba3
  8. Domain d2csdb5: 2csd B:465-518 [203831]
    Other proteins in same PDB: d2csda1, d2csdb1
    automated match to d2csba4

More info for Protein Topoisomerase V from a.60.2.4: Topoisomerase V repeat domain

Timeline for Protein Topoisomerase V from a.60.2.4: Topoisomerase V repeat domain:

Protein Topoisomerase V from a.60.2.4: Topoisomerase V repeat domain first appeared in SCOP 1.73
Protein Topoisomerase V from a.60.2.4: Topoisomerase V repeat domain appears in SCOPe 2.07