SCOPe 2.08: Protein: TraM

Lineage for Protein: TraM

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)

Fold a.241: TraM-like [140580] (1 superfamily)
multihelical oligomeric protein; structure of whole subunit is not known; the N-terminal part is implicated in DNA binding, the middle region forms tetrameric parallel coiled coil, surrounded by the C-terminal helices

Superfamily a.241.1: TraM-like [140581] (1 family)
automatically mapped to Pfam PF05261
Family a.241.1.1: TraM-like [140582] (1 protein)
Pfam PF05261
Protein TraM [140583] (2 species)
also includes the N-terminal domain structure 1dp3, previously classified into a different family (63566)

Species:

Escherichia coli K-12 [TaxId:83333] [158509] (1 PDB entry)
- Domains for 3d8a:
  1. Domain d3d8aa_: 3d8a A: [157448]
    automated match to d2g7oa1
    protein/DNA complex
  2. Domain d3d8ab_: 3d8a B: [157449]
    automated match to d2g7oa1
    protein/DNA complex
  3. Domain d3d8ac_: 3d8a C: [157450]
    automated match to d2g7oa1
    protein/DNA complex
  4. Domain d3d8ad_: 3d8a D: [157451]
    automated match to d2g7oa1
    protein/DNA complex
  5. Domain d3d8ae_: 3d8a E: [157452]
    automated match to d2g7oa1
    protein/DNA complex
  6. Domain d3d8af_: 3d8a F: [157453]
    automated match to d2g7oa1
    protein/DNA complex
  7. Domain d3d8ag_: 3d8a G: [157454]
    automated match to d2g7oa1
    protein/DNA complex
  8. Domain d3d8ah_: 3d8a H: [157455]
    automated match to d2g7oa1
    protein/DNA complex
Escherichia coli [TaxId:562] [140584] (2 PDB entries)
Uniprot P10026 50-127! Uniprot P10026 60-167
1. Domain for 2g7o:
  - Domain d2g7oa1: 2g7o A:60-127 [134736]
2. Domain for 2g9e:
  - Domain d2g9ea1: 2g9e A:60-127 [134799]

More info for Protein TraM from a.241.1.1: TraM-like

Timeline for Protein TraM from a.241.1.1: TraM-like:

Protein TraM from a.241.1.1: TraM-like first appeared in SCOP 1.73
Protein TraM from a.241.1.1: TraM-like appears in SCOPe 2.07