Lineage for Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 641597Fold a.43: Ribbon-helix-helix [47597] (1 superfamily)
    core: 4 helices; array of 2 hairpins, opened
  4. 641598Superfamily a.43.1: Ribbon-helix-helix [47598] (8 families) (S)
    formerly Met repressor-like; dimeric proteins; the N-termini form a small beta-sheet ribbon
  5. 641641Family a.43.1.3: CopG-like [100970] (3 proteins)
    similar to the phage repressor family
  6. 641642Protein Nickel responsive regulator NikR, N-terminal domain [101205] (2 species)
  7. 641643Species Archaeon Pyrococcus horikoshii [TaxId:53953] [140543] (5 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 2bj1:
    1. 641654Domain d2bj1a1: 2bj1 A:1-50 [128596]
      Other proteins in same PDB: d2bj1a2, d2bj1b2
      complexed with cl, ni
    2. 641655Domain d2bj1b1: 2bj1 B:1-50 [128598]
      Other proteins in same PDB: d2bj1a2, d2bj1b2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, ni
  2. Domain(s) for 2bj3:
    1. 641648Domain d2bj3a1: 2bj3 A:1-50 [128600]
      Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, mg
    2. 641649Domain d2bj3b1: 2bj3 B:2-50 [128602]
      Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, mg
    3. 641650Domain d2bj3c1: 2bj3 C:1-50 [128604]
      Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, mg
    4. 641651Domain d2bj3d1: 2bj3 D:2-50 [128606]
      Other proteins in same PDB: d2bj3a2, d2bj3b2, d2bj3c2, d2bj3d2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, mg
  3. Domain(s) for 2bj7:
    1. 641644Domain d2bj7a1: 2bj7 A:1-50 [128608]
      Other proteins in same PDB: d2bj7a2, d2bj7b2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, edo, ni, pg4
    2. 641645Domain d2bj7b1: 2bj7 B:1-50 [128610]
      Other proteins in same PDB: d2bj7a2, d2bj7b2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, edo, ni, pg4
  4. Domain(s) for 2bj8:
    1. 641646Domain d2bj8a1: 2bj8 A:1-50 [128612]
      Other proteins in same PDB: d2bj8a2, d2bj8b2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, edo, epe, ni, pg4
    2. 641647Domain d2bj8b1: 2bj8 B:1-50 [128614]
      Other proteins in same PDB: d2bj8a2, d2bj8b2
      automatically matched to 2BJ1 A:1-50
      complexed with cl, edo, epe, ni, pg4
  5. Domain(s) for 2bj9:
    1. 641652Domain d2bj9a1: 2bj9 A:1-50 [128616]
      Other proteins in same PDB: d2bj9a2, d2bj9b2
      automatically matched to 2BJ1 A:1-50
      complexed with ni, pg4, po4
    2. 641653Domain d2bj9b1: 2bj9 B:1-50 [128618]
      Other proteins in same PDB: d2bj9a2, d2bj9b2
      automatically matched to 2BJ1 A:1-50
      complexed with ni, pg4, po4

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain:

  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain is new in SCOP 1.73
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain appears in SCOP 1.75
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain appears in the current release, SCOPe 2.08, called Species Pyrococcus horikoshii [TaxId:53953] from a.43.1.3 Nickel responsive regulator NikR, N-terminal domain