SCOPe 2.07: Protein: Regulatory protein cII

Lineage for Protein: Regulatory protein cII

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
core: 4 helices; folded leaf, closed
Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families)

Family a.35.1.9: Bacteriophage CII protein [140520] (1 protein)
Pfam PF05269; a compact helix-swapped dimer of the canonical fold; includes the extra C-terminal teramerisation region (alpha-helix); in the tetramer-DNA complex only two of the four HTH motifs interact with DNA

Protein Regulatory protein cII [140521] (1 species)

Species:

Bacteriophage lambda [TaxId:10710] [140522] (3 PDB entries)
Uniprot P03042 2-80! Uniprot P03042 4-81
1. Domains for 1xwr:
  1. Domain d1xwra1: 1xwr A:2-80 [122406]
    complexed with ipa
  2. Domain d1xwrb_: 1xwr B: [122407]
    automated match to d1xwra1
    complexed with ipa
  3. Domain d1xwrc_: 1xwr C: [122408]
    automated match to d1xwra1
    complexed with ipa
  4. Domain d1xwrd_: 1xwr D: [122409]
    automated match to d1xwra1
    complexed with ipa
2. Domains for 1zpq:
  1. Domain d1zpqa_: 1zpq A: [125469]
    automated match to d1xwra1
  2. Domain d1zpqb_: 1zpq B: [125470]
    automated match to d1xwra1
  3. Domain d1zpqc_: 1zpq C: [125471]
    automated match to d1xwra1
  4. Domain d1zpqd_: 1zpq D: [125472]
    automated match to d1xwra1
3. Domains for 1zs4:
  1. Domain d1zs4a1: 1zs4 A:4-81 [125585]
    Other proteins in same PDB: d1zs4a2, d1zs4b3
    protein/DNA complex
  2. Domain d1zs4b2: 1zs4 B:4-81 [125586]
    Other proteins in same PDB: d1zs4a2, d1zs4b3
    automated match to d1zs4a1
    protein/DNA complex
  3. Domain d1zs4c_: 1zs4 C: [125587]
    Other proteins in same PDB: d1zs4a2, d1zs4b3
    automated match to d1zs4a1
    protein/DNA complex
  4. Domain d1zs4d_: 1zs4 D: [125588]
    Other proteins in same PDB: d1zs4a2, d1zs4b3
    automated match to d1zs4a1
    protein/DNA complex

More info for Protein Regulatory protein cII from a.35.1.9: Bacteriophage CII protein

Timeline for Protein Regulatory protein cII from a.35.1.9: Bacteriophage CII protein:

Protein Regulatory protein cII from a.35.1.9: Bacteriophage CII protein first appeared in SCOP 1.73
Protein Regulatory protein cII from a.35.1.9: Bacteriophage CII protein appears in SCOPe 2.06
Protein Regulatory protein cII from a.35.1.9: Bacteriophage CII protein appears in the current release, SCOPe 2.08