SCOPe 2.07: Protein: Vacuolar protein sorting-associated protein 28, VPS28

Lineage for Protein: Vacuolar protein sorting-associated protein 28, VPS28

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.2: Long alpha-hairpin [46556] (20 superfamilies)
2 helices; antiparallel hairpin, left-handed twist

Superfamily a.2.17: Endosomal sorting complex assembly domain [140111] (4 families)

(S)

forms 'fan'-like heterooligomers, in which the domains of different subunit make similar interactions at the tip of the hairpin

Family a.2.17.2: VPS28 N-terminal domain [140115] (2 proteins)
includes structurally variable linker region
Protein Vacuolar protein sorting-associated protein 28, VPS28 [140116] (1 species)

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140117] (3 PDB entries)
Uniprot Q02767 15-125! Uniprot Q02767 23-123
1. Domains for 2caz:
  1. Domain d2cazb1: 2caz B:23-123 [130170]
    Other proteins in same PDB: d2caza1, d2cazc1, d2cazd1
  2. Domain d2caze1: 2caz E:23-123 [130173]
    Other proteins in same PDB: d2caza1, d2cazc1, d2cazd1
    automatically matched to 2CAZ B:23-123
2. Domains for 2f66:
  1. Domain d2f66b1: 2f66 B:15-125 [133028]
    Other proteins in same PDB: d2f66a1, d2f66a2, d2f66c1, d2f66d2, d2f66d3, d2f66f_
    complexed with so4
  2. Domain d2f66e_: 2f66 E: [133031]
    Other proteins in same PDB: d2f66a1, d2f66a2, d2f66c1, d2f66d2, d2f66d3, d2f66f_
    automated match to d2f66b1
    complexed with so4
3. Domains for 2f6m:
  1. Domain d2f6mb2: 2f6m B:13-118 [133052]
    Other proteins in same PDB: d2f6ma2, d2f6ma3, d2f6mb3, d2f6mc2, d2f6mc3
    automated match to d2f6mb1
    complexed with ddq, mg
  2. Domain d2f6md_: 2f6m D: [133054]
    Other proteins in same PDB: d2f6ma2, d2f6ma3, d2f6mb3, d2f6mc2, d2f6mc3
    automated match to d2f6mb1
    complexed with ddq, mg

More info for Protein Vacuolar protein sorting-associated protein 28, VPS28 from a.2.17.2: VPS28 N-terminal domain

Timeline for Protein Vacuolar protein sorting-associated protein 28, VPS28 from a.2.17.2: VPS28 N-terminal domain:

Protein Vacuolar protein sorting-associated protein 28, VPS28 from a.2.17.2: VPS28 N-terminal domain first appeared in SCOP 1.73
Protein Vacuolar protein sorting-associated protein 28, VPS28 from a.2.17.2: VPS28 N-terminal domain appears in SCOPe 2.06
Protein Vacuolar protein sorting-associated protein 28, VPS28 from a.2.17.2: VPS28 N-terminal domain appears in the current release, SCOPe 2.08