SCOPe 2.04: Domain d2yu9i2: 2yu9 I:50-120

Lineage for d2yu9i2 (2yu9 I:50-120)

1. Root: SCOPe 2.04

2. Class g: Small proteins [56992] (91 folds)

3. Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
   metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2

4. Superfamily g.41.3: Zinc beta-ribbon [57783] (5 families)

5. Family g.41.3.1: Transcriptional factor domain [57784] (5 proteins)

6. Protein RBP9 subunit of RNA polymerase II [57787] (3 species)
   contains two differently decorated domains of this fold

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64575] (24 PDB entries)
   Uniprot P27999; part of multichain biological unit

8. Domain d2yu9i2: 2yu9 I:50-120 [140073]
   Other proteins in same PDB: d2yu9a1, d2yu9b1, d2yu9c1, d2yu9c2, d2yu9e1, d2yu9e2, d2yu9f1, d2yu9h1, d2yu9j1, d2yu9k1, d2yu9l1
   automatically matched to d1i3qi2
   protein/DNA complex; protein/RNA complex; complexed with mg, utp, zn

Details for d2yu9i2

PDB Entry: 2yu9, 3.4 Å

PDB Description: rna polymerase ii elongation complex in 150 mm mg+2 with utp

PDB Compounds: (I:) DNA-directed RNA polymerase II subunit 9

SCOPe Domain Sequences for d2yu9i2:

Sequence; same for both SEQRES and ATOM records:

>d2yu9i2 g.41.3.1 (I:50-120) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tnigetagvvqdigsdptlprsdrecpkchsrenvffqsqqrrkdtsmvlffvclscshi
ftsdqknkrtq

Timeline for d2yu9i2:

• d2yu9i2 first appeared in SCOP 1.73
  
• d2yu9i2 appears in SCOPe 2.03
  
• d2yu9i2 appears in SCOPe 2.05
  
• d2yu9i2 appears in the current release, SCOPe 2.08