Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.2: RNA-polymerase beta-prime [64490] (4 proteins) |
Protein RBP1 [64486] (2 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64487] (24 PDB entries) Uniprot P04050; part of multichain biological unit |
Domain d2yu9a1: 2yu9 A:3-1450 [140064] Other proteins in same PDB: d2yu9b1, d2yu9c1, d2yu9c2, d2yu9e1, d2yu9e2, d2yu9f1, d2yu9h1, d2yu9i1, d2yu9i2, d2yu9j1, d2yu9k1, d2yu9l1 automatically matched to d1i50a_ protein/DNA complex; protein/RNA complex; complexed with mg, utp, zn |
PDB Entry: 2yu9 (more details), 3.4 Å
SCOPe Domain Sequences for d2yu9a1:
Sequence, based on SEQRES records: (download)
>d2yu9a1 e.29.1.2 (A:3-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsid rnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelm rqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglklv gswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvp pppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvat ymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleld qvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskrag diqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadf dgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfie ldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkd ngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngf stgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrfl neardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdr tlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlv kaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdll ntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirr iiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccll rsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtln tfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehtt lksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraam ndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlkk ientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpgi dptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqgglt svtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgafd vmideesl
>d2yu9a1 e.29.1.2 (A:3-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} gqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsid rnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnelm rqalaikdskkrfaaiwtlcktkmvcetdvpslvsrggcgntqptirkdglklvgswklr vlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppvrpsisfnesqrged dltfkladilkanisletlehngaphhaieeaesllqfhvatymdndiagqpqalqksgr pvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgvpksiaktltypevv tpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiqlqygwkverhimdnd pvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgdemnlhvpqseetrae lsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqvlnmlywvpdwdgvi ptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngmliidgqiifgvvekk tvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgigdtiadgptmreit etiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflneardkagrlaevnlkdl nnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlphfskddyspeskgfv ensylrgltpqefffhamggreglidtavktaetgyiqrrlvkaledimvhydnttrnsl gnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdhtldpsllesgseil gdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqnaqqtfhidhtkpsd ltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrlatrrvlqeyrltkq afdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlntfhfagvaskkvtsgvpr lkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydpdprs tvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfviwse dndekliircrvvraeedhmlkkientmlenitlrgveniervvmmkydrkvpsptgeyv kepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevynviasd gsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeagasaeld dcrgvsenvilgqmapigtgafdvmideesl
Timeline for d2yu9a1: