SCOPe 2.08: Domain d2q3ob_: 2q3o B:

Lineage for d2q3ob_ (2q3o B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein automated matches [190228] (20 species)
   not a true protein

7. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187180] (2 PDB entries)

8. Domain d2q3ob_: 2q3o B: [139797]
   automated match to d1q45a_
   complexed with fmn

Details for d2q3ob_

PDB Entry: 2q3o, 2 Å

PDB Description: Ensemble refinement of the protein crystal structure of 12-oxo-phytodienoate reductase isoform 3

PDB Compounds: (B:) 12-oxophytodienoate reductase 3

SCOPe Domain Sequences for d2q3ob_:

Sequence, based on SEQRES records:

>d2q3ob_ c.1.4.1 (B:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
netlfssykmgrfdlshrvvlapmtrcralngvpnaalaeyyaqrttpggflisegtmvs
pgsagfphvpgiysdeqveawkqvveavhakggfifcqlwhvgrashavyqpnggspiss
tnkpisenrwrvllpdgshvkypkpraleaseiprvvedyclsalnairagfdgieihga
hgylidqflkdgindrtdqyggsianrcrflkqvvegvvsaigaskvgvrvspaidhlda
tdsdplslglavvgmlnklqgvngsklaylhvtqpryhaygqtesgrqgsdeeeaklmks
lrmayngtfmssggfnkelgmqavqqgdadlvsygrlfianpdlvsrfkidgelnkynrk
tfytqdpvvgytdypfl

Sequence, based on observed residues (ATOM records):

>d2q3ob_ c.1.4.1 (B:) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
netlfssykmgrfdlshrvvlapmtrcralngvpnaalaeyyaqrttpggflisegtmvs
pgsagfphvpgiysdeqveawkqvveavhakggfifcqlwhvgrashavyqpnggspiss
tnkpisenrwrvllpdgshvkypkpraleaseiprvvedyclsalnairagfdgieihga
hgylidqflkdgindrtdqyggsianrcrflkqvvegvvsaigaskvgvrvspaidhlda
tdsdplslglavvgmlnklqgvngsklaylhvtqpryhaydeeeaklmkslrmayngtfm
ssggfnkelgmqavqqgdadlvsygrlfianpdlvsrfkidgelnkynrktfytqdpvvg
ytdypfl

Timeline for d2q3ob_:

• d2q3ob_ first appeared in SCOP 1.73, called d2q3ob1
  
• d2q3ob_ appears in SCOPe 2.07