SCOP 1.73: Domain d2pfqa3: 2pfq A:386-575

Lineage for d2pfqa3 (2pfq A:386-575)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (11 families)

5. Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins)
   insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain

6. Protein DNA polymerase lambda [102943] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [102944] (14 PDB entries)

8. Domain d2pfqa3: 2pfq A:386-575 [139683]
   Other proteins in same PDB: d2pfqa1, d2pfqa2
   automatically matched to d1rzta3
   complexed with dcp, mg, mn, na, ppv; mutant

Details for d2pfqa3

PDB Entry: 2pfq, 2.1 Å

PDB Description: manganese promotes catalysis in a dna polymerase lambda-dna crystal

PDB Compounds: (A:) DNA polymerase lambda

SCOP Domain Sequences for d2pfqa3:

Sequence; same for both SEQRES and ATOM records:

>d2pfqa3 d.218.1.2 (A:386-575) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
rmpreeateieqtvqkaaqafnsgllcvacgsyrrgkatcgdvdvlithpdgrshrgifs
rlldslrqegfltddlvsqeengqqqkylgvcrlpgpgrrhrrldiivvpysefacally
ftgsahfnrsmralaktkgmslsehalstavvrnthgakvgpgrvlptptekdvfrllgl
pyrepaerdw

Timeline for d2pfqa3:

• d2pfqa3 is new in SCOP 1.73
  
• d2pfqa3 appears in SCOP 1.75
  
• d2pfqa3 appears in the current release, SCOPe 2.08