SCOPe 2.08: Domain d2oxra2: 2oxr A:1-243

Lineage for d2oxra2 (2oxr A:1-243)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.10: Nitrogenase iron protein-like [52652] (16 proteins)
   core: parallel beta-sheet of 7 strands; order 3241567

6. Protein ATP(GTP)-binding protein PAB0955 [142297] (1 species)
   PYRAB14380; belongs to Pfam PF03029

7. Species Pyrococcus abyssi [TaxId:29292] [142298] (7 PDB entries)
   Uniprot Q9UYR9 30-273

8. Domain d2oxra2: 2oxr A:1-243 [139423]
   Other proteins in same PDB: d2oxra3
   automated match to d1yr6a1
   complexed with gdp, mg

Details for d2oxra2

PDB Entry: 2oxr, 2.4 Å

PDB Description: PAB0955 crystal structure : a GTPase in GDP and Mg bound form from Pyrococcus abyssi (after GTP hydrolysis)

PDB Compounds: (A:) ATP(GTP)binding protein

SCOPe Domain Sequences for d2oxra2:

Sequence; same for both SEQRES and ATOM records:

>d2oxra2 c.37.1.10 (A:1-243) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
mivvfvgtagsgkttltgefgrylednykvayvnldtgvkelpyepsidvrefvtveeim
regygpngaivesydrlmekfneylnkilrlekendyvlidtpgqmetflfhefgvrlme
nlpyplvvyisdpeilkkpndycfvrffallidlrlgattipalnkvdllseeekerhrk
yfedidyltarlkldpsmqglmaykmcsmmtevlppvrvlylsaktregfedletlayeh
yct

Timeline for d2oxra2:

• d2oxra2 first appeared in SCOP 1.73, called d2oxra1
  
• d2oxra2 appears in SCOPe 2.07