SCOPe 2.08: Domain d2osub2: 2osu B:1-327

Lineage for d2osub2 (2osu B:1-327)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.2: Glutaminase [90084] (2 proteins)
   Pfam PF04960

6. Protein Probable glutaminase YbgJ [90085] (1 species)

7. Species Bacillus subtilis [TaxId:1423] [90086] (4 PDB entries)

8. Domain d2osub2: 2osu B:1-327 [139302]
   Other proteins in same PDB: d2osua3, d2osub3
   automated match to d1mkia_
   complexed with don

Details for d2osub2

PDB Entry: 2osu, 2.29 Å

PDB Description: Probable glutaminase from Bacillus subtilis complexed with 6-diazo-5-oxo-L-norleucine

PDB Compounds: (B:) Glutaminase 1

SCOPe Domain Sequences for d2osub2:

Sequence, based on SEQRES records:

>d2osub2 e.3.1.2 (B:1-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
mkelikehqkdinpalqlhdwveyyrpfaangqsanyipalgkvndsqlgicvlepdgtm
ihagdwnvsftmqsiskvisfiaacmsrgipyvldrvdveptgdafnsiirleinkpgkp
fnpminagaltiasilpgesayekleflysvmetligkrpriheevfrsewetahrnral
ayylketnfleaeveetlevylkqcamesttedialiglilahdgyhpirheqvipkdva
klakalmltcgmynasgkyaafvgvpaksgvsggimalvppsarreqpfqsgcgigiygp
aideygnsltggmllkhmaqewelsif

Sequence, based on observed residues (ATOM records):

>d2osub2 e.3.1.2 (B:1-327) Probable glutaminase YbgJ {Bacillus subtilis [TaxId: 1423]}
mkelikenpalqlhdwveyyrpfaangqsanyipalgkvndsqlgicvlepdgtmihagd
wnvsftmqsiskvisfiaacmsrgipyvldrvdvepgkpfnpminagaltiasilpgesa
yekleflysvmetligkrpriheevfrsewetahrnralayylketnfleaeveetlevy
lkqcamesttedialiglilahdgyhpirheqvipkdvaklakalmltcgmynasgkyaa
fvgvpaksgvsggimalvppsqpfqsgcgigiygpaideygnsltggmllkhmaqewels
if

Timeline for d2osub2:

• d2osub2 first appeared in SCOP 1.73, called d2osub1
  
• d2osub2 appears in SCOPe 2.07