Lineage for d2orkb1 (2ork B:235-355)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. Family d.169.1.0: automated matches [191331] (1 protein)
    not a true family
  6. Protein automated matches [190159] (21 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [186882] (109 PDB entries)
  8. Domain d2orkb1: 2ork B:235-355 [139269]
    Other proteins in same PDB: d2orka2, d2orkb2, d2orkc2
    complexed with ca, ipd

Details for d2orkb1

PDB Entry: 2ork (more details), 1.89 Å

PDB Description: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with inositol-1-phosphate
PDB Compounds: (B:) Pulmonary surfactant-associated protein D

SCOPe Domain Sequences for d2orkb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2orkb1 d.169.1.0 (B:235-355) automated matches {Human (Homo sapiens) [TaxId: 9606]}
pngqsvgekifktagfvkpfteaqllctqaggqlasprsaaenaalqqlvvakneaafls
mtdsktegkftyptgeslvysnwapgepnddggsedcveiftngkwndracgekrlvvce
f

SCOPe Domain Coordinates for d2orkb1 are not available.

Timeline for d2orkb1:

Domains from same chain:
(mouse over for more information)
d2orkb2
Domains from other chains:
(mouse over for more information)
d2orka1, d2orka2, d2orkc1, d2orkc2