SCOPe 2.06: Domain d2odgb_: 2odg B:

Lineage for d2odgb_ (2odg B:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.5: Barrier-to-autointegration factor, BAF [47798] (1 family)
   contains one classic and one pseudo HhH motifs
   automatically mapped to Pfam PF02961

5. Family a.60.5.1: Barrier-to-autointegration factor, BAF [47799] (1 protein)

6. Protein Barrier-to-autointegration factor, BAF [47800] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [47801] (7 PDB entries)

8. Domain d2odgb_: 2odg B: [139028]
   Other proteins in same PDB: d2odgc2, d2odgc3
   automated match to d1ci4a_

Details for d2odgb_

PDB Entry: 2odg

PDB Description: complex of barrier-to-autointegration factor and lem-domain of emerin

PDB Compounds: (B:) barrier-to-autointegration factor

SCOPe Domain Sequences for d2odgb_:

Sequence; same for both SEQRES and ATOM records:

>d2odgb_ a.60.5.1 (B:) Barrier-to-autointegration factor, BAF {Human (Homo sapiens) [TaxId: 9606]}
mttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfr
ewlkdtcganakqsrdcfgclrewcdafl

Timeline for d2odgb_:

• d2odgb_ first appeared in SCOP 1.73, called d2odgb1
  
• d2odgb_ appears in SCOPe 2.05
  
• d2odgb_ appears in SCOPe 2.07
  
• d2odgb_ appears in the current release, SCOPe 2.08