SCOPe 2.06: Domain d2odga_: 2odg A:

Lineage for d2odga_ (2odg A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.5: Barrier-to-autointegration factor, BAF [47798] (1 family)
   contains one classic and one pseudo HhH motifs
   automatically mapped to Pfam PF02961

5. Family a.60.5.1: Barrier-to-autointegration factor, BAF [47799] (1 protein)

6. Protein Barrier-to-autointegration factor, BAF [47800] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [47801] (7 PDB entries)

8. Domain d2odga_: 2odg A: [139027]
   Other proteins in same PDB: d2odgc2, d2odgc3
   automated match to d1ci4a_

Details for d2odga_

PDB Entry: 2odg

PDB Description: complex of barrier-to-autointegration factor and lem-domain of emerin

PDB Compounds: (A:) barrier-to-autointegration factor

SCOPe Domain Sequences for d2odga_:

Sequence; same for both SEQRES and ATOM records:

>d2odga_ a.60.5.1 (A:) Barrier-to-autointegration factor, BAF {Human (Homo sapiens) [TaxId: 9606]}
mttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfr
ewlkdtcganakqsrdcfgclrewcdafl

Timeline for d2odga_:

• d2odga_ first appeared in SCOP 1.73, called d2odga1
  
• d2odga_ appears in SCOPe 2.05
  
• d2odga_ appears in SCOPe 2.07
  
• d2odga_ appears in the current release, SCOPe 2.08