SCOPe 2.01: Domain d2ob7c1: 2ob7 C:3-124

Lineage for d2ob7c1 (2ob7 C:3-124)

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.111: Small protein B (SmpB) [74981] (1 superfamily)
   barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold

4. Superfamily b.111.1: Small protein B (SmpB) [74982] (1 family)

5. Family b.111.1.1: Small protein B (SmpB) [74983] (1 protein)

6. Protein Small protein B (SmpB) [74984] (2 species)
   tmRNA-binding protein; SsrA-binding protein

7. Species Aquifex aeolicus [TaxId:63363] [74985] (4 PDB entries)

8. Domain d2ob7c1: 2ob7 C:3-124 [139005]
   automatically matched to d1k8ha_
   protein/RNA complex

Details for d2ob7c1

PDB Entry: 2ob7, 13.6 Å

PDB Description: structure of tmrna-(smpb)2 complex as inferred from cryo-em

PDB Compounds: (C:) SsrA-binding protein

SCOPe Domain Sequences for d2ob7c1:

Sequence, based on SEQRES records:

>d2ob7c1 b.111.1.1 (C:3-124) Small protein B (SmpB) {Aquifex aeolicus [TaxId: 63363]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapykhatienhdplrkrklllhkreimrlygkvqekgytiiplklywknnkvkvli
al

Sequence, based on observed residues (ATOM records):

>d2ob7c1 b.111.1.1 (C:3-124) Small protein B (SmpB) {Aquifex aeolicus [TaxId: 63363]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapykhanhdplrkrklllhkreimrlygkvqeiiplklywknnkvkvlial

Timeline for d2ob7c1:

• d2ob7c1 first appeared in SCOP 1.73
  
• d2ob7c1 appears in SCOP 1.75
  
• d2ob7c1 appears in SCOPe 2.02
  
• d2ob7c1 appears in the current release, SCOPe 2.08