SCOPe 2.07: Domain d2ob7b1: 2ob7 B:3-130

Lineage for d2ob7b1 (2ob7 B:3-130)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.111: Small protein B (SmpB) [74981] (1 superfamily)
   barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold

4. Superfamily b.111.1: Small protein B (SmpB) [74982] (1 family)

5. Family b.111.1.1: Small protein B (SmpB) [74983] (1 protein)

6. Protein Small protein B (SmpB) [74984] (2 species)
   tmRNA-binding protein; SsrA-binding protein

7. Species Thermus thermophilus [TaxId:274] [82130] (5 PDB entries)
   Uniprot Q8RR57 4-123

8. Domain d2ob7b1: 2ob7 B:3-130 [139004]
   automatically matched to d1k8ha_
   protein/RNA complex

Details for d2ob7b1

PDB Entry: 2ob7, 13.6 Å

PDB Description: structure of tmrna-(smpb)2 complex as inferred from cryo-em

PDB Compounds: (B:) SsrA-binding protein

SCOPe Domain Sequences for d2ob7b1:

Sequence, based on SEQRES records:

>d2ob7b1 b.111.1.1 (B:3-130) Small protein B (SmpB) {Thermus thermophilus [TaxId: 274]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapykhatienhdplrkrklllhkreimrlygkvqekgytiiplklywknnkvkvli
alakgkkl

Sequence, based on observed residues (ATOM records):

>d2ob7b1 b.111.1.1 (B:3-130) Small protein B (SmpB) {Thermus thermophilus [TaxId: 274]}
sdkiipiaenkeakakydiletyeagivlkgsevkslrekgtvsfkdsfvriengeawly
nlyiapynhdplrkrklllhkreimrlygkvqekgytiiplklywknnkvkvlialakgk
kl

Timeline for d2ob7b1:

• d2ob7b1 first appeared in SCOP 1.73
  
• d2ob7b1 appears in SCOPe 2.06
  
• d2ob7b1 appears in the current release, SCOPe 2.08