SCOPe 2.08: Domain d2o8rb1: 2o8r B:11-112

Lineage for d2o8rb1 (2o8r B:11-112)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.7: Spectrin repeat-like [46965] (16 superfamilies)
   3 helices; bundle, closed, left-handed twist; up-and-down

4. Superfamily a.7.15: PPK N-terminal domain-like [140356] (1 family)
   automatically mapped to Pfam PF13089

5. Family a.7.15.1: PPK N-terminal domain-like [140357] (1 protein)
   N-terminal part of Pfam PF02503
   this is a repeat family; one repeat unit is 2o8r B:11-112 found in domain

6. Protein Polyphosphate kinase, PPK [140358] (2 species)

7. Species Porphyromonas gingivalis [TaxId:837] [140360] (1 PDB entry)
   Uniprot Q7MTR1 4-112

8. Domain d2o8rb1: 2o8r B:11-112 [138937]
   Other proteins in same PDB: d2o8ra2, d2o8ra3, d2o8ra4, d2o8rb2, d2o8rb3, d2o8rb4
   automated match to d2o8ra1
   complexed with so4

Details for d2o8rb1

PDB Entry: 2o8r, 2.7 Å

PDB Description: crystal structure of polyphosphate kinase from porphyromonas gingivalis

PDB Compounds: (B:) Polyphosphate kinase

SCOPe Domain Sequences for d2o8rb1:

Sequence, based on SEQRES records:

>d2o8rb1 a.7.15.1 (B:11-112) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
rdmswlsfnervlmeaadrtlpvydrikflsifssnleefytvrvayhqavlqkrrdrse
aeedsdadahilqairetvirqdelyyrifydqilptleehg

Sequence, based on observed residues (ATOM records):

>d2o8rb1 a.7.15.1 (B:11-112) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]}
rdmswlsfnervlmeaadrtlpvydrikflsifssnleefytvrvaylqairetvirqde
lyyrifydqilptleehg

Timeline for d2o8rb1:

• d2o8rb1 first appeared in SCOP 1.73
  
• d2o8rb1 appears in SCOPe 2.07