Lineage for d2nxyb1 (2nxy B:1001-1097)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 781542Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 781543Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 781544Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (32 proteins)
  6. 781640Protein CD4 V-set domains [48737] (2 species)
  7. 781641Species Human (Homo sapiens) [TaxId:9606] [48738] (26 PDB entries)
  8. 781642Domain d2nxyb1: 2nxy B:1001-1097 [138745]
    Other proteins in same PDB: d2nxya1, d2nxyb2, d2nxyc1, d2nxyc2, d2nxyd1, d2nxyd2
    automatically matched to d1cdi_1
    complexed with hez, nag, trs; mutant

Details for d2nxyb1

PDB Entry: 2nxy (more details), 2 Å

PDB Description: hiv-1 gp120 envelope glycoprotein(s334a) complexed with cd4 and antibody 17b
PDB Compounds: (B:) T-cell surface glycoprotein cd4

SCOP Domain Sequences for d2nxyb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo sapiens) [TaxId: 9606]}
kkvvlgkkgdtveltctasqkksiqfhwknsnqikilgnqgsfltkgpsklndradsrrs
lwdqgnfpliiknlkiedsdtyicevedqkeevqllv

SCOP Domain Coordinates for d2nxyb1:

Click to download the PDB-style file with coordinates for d2nxyb1.
(The format of our PDB-style files is described here.)

Timeline for d2nxyb1: