Lineage for d2nvxl1 (2nvx L:25-70)

  1. Root: SCOPe 2.05
  2. 1959977Class g: Small proteins [56992] (92 folds)
  3. 1965821Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 1966671Superfamily g.41.9: RNA polymerase subunits [63393] (3 families) (S)
  5. 1966672Family g.41.9.2: RBP12 subunit of RNA polymerase II [64576] (2 proteins)
  6. 1966673Protein RBP12 subunit of RNA polymerase II [64577] (2 species)
  7. 1966674Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64578] (30 PDB entries)
    Uniprot P40422; part of multichain biological unit
  8. 1966698Domain d2nvxl1: 2nvx L:25-70 [138679]
    Other proteins in same PDB: d2nvxa1, d2nvxb1, d2nvxc1, d2nvxc2, d2nvxe1, d2nvxe2, d2nvxf1, d2nvxh1, d2nvxi1, d2nvxi2, d2nvxj1, d2nvxk1
    automatically matched to d1i3ql_
    protein/DNA complex; protein/RNA complex; complexed with dut, mg, zn

Details for d2nvxl1

PDB Entry: 2nvx (more details), 3.6 Å

PDB Description: RNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTP
PDB Compounds: (L:) DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide

SCOPe Domain Sequences for d2nvxl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nvxl1 g.41.9.2 (L:25-70) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
atlkyicaecssklslsrtdavrckdcghrillkartkrlvqfear

SCOPe Domain Coordinates for d2nvxl1:

Click to download the PDB-style file with coordinates for d2nvxl1.
(The format of our PDB-style files is described here.)

Timeline for d2nvxl1: