Lineage for d2nvqi2 (2nvq I:50-120)

  1. Root: SCOPe 2.06
  2. 2256768Class g: Small proteins [56992] (94 folds)
  3. 2262912Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
    metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
  4. 2262985Superfamily g.41.3: Zinc beta-ribbon [57783] (5 families) (S)
  5. 2262986Family g.41.3.1: Transcriptional factor domain [57784] (5 proteins)
  6. 2262987Protein RBP9 subunit of RNA polymerase II [57787] (3 species)
    contains two differently decorated domains of this fold
  7. 2262988Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64575] (24 PDB entries)
    Uniprot P27999; part of multichain biological unit
  8. 2263006Domain d2nvqi2: 2nvq I:50-120 [138643]
    Other proteins in same PDB: d2nvqa_, d2nvqb_, d2nvqc1, d2nvqc2, d2nvqe1, d2nvqe2, d2nvqf_, d2nvqh_, d2nvqj_, d2nvqk_, d2nvql_
    automated match to d1twfi2
    protein/DNA complex; protein/RNA complex; complexed with dut, mg, zn

Details for d2nvqi2

PDB Entry: 2nvq (more details), 2.9 Å

PDB Description: rna polymerase ii elongation complex in 150 mm mg+2 with 2'dutp
PDB Compounds: (I:) DNA-directed RNA polymerase II subunit 9

SCOPe Domain Sequences for d2nvqi2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2nvqi2 g.41.3.1 (I:50-120) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tnigetagvvqdigsdptlprsdrecpkchsrenvffqsqqrrkdtsmvlffvclscshi
ftsdqknkrtq

SCOPe Domain Coordinates for d2nvqi2:

Click to download the PDB-style file with coordinates for d2nvqi2.
(The format of our PDB-style files is described here.)

Timeline for d2nvqi2: