SCOPe 2.02: Domain d2nvqc2: 2nvq C:42-172

Lineage for d2nvqc2 (2nvq C:42-172)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.181: Insert subdomain of RNA polymerase alpha subunit [56552] (1 superfamily)
   unusual fold; contains a left-handed beta-alpha-beta unit

4. Superfamily d.181.1: Insert subdomain of RNA polymerase alpha subunit [56553] (1 family)

5. Family d.181.1.1: Insert subdomain of RNA polymerase alpha subunit [56554] (2 proteins)

6. Protein RPB3 [64462] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64463] (24 PDB entries)
   Uniprot P16370; part of multichain biological unit

8. Domain d2nvqc2: 2nvq C:42-172 [138637]
   Other proteins in same PDB: d2nvqa1, d2nvqb_, d2nvqc1, d2nvqe1, d2nvqe2, d2nvqf1, d2nvqh_, d2nvqi1, d2nvqi2, d2nvqj_, d2nvqk_, d2nvql1
   automatically matched to d1i3qc2
   protein/DNA complex; protein/RNA complex; complexed with dut, mg, zn

Details for d2nvqc2

PDB Entry: 2nvq, 2.9 Å

PDB Description: rna polymerase ii elongation complex in 150 mm mg+2 with 2'dutp

PDB Compounds: (C:) DNA-directed RNA polymerase II 45 kDa polypeptide

SCOPe Domain Sequences for d2nvqc2:

Sequence; same for both SEQRES and ATOM records:

>d2nvqc2 d.181.1.1 (C:42-172) RPB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ptlaidsvevetnttvladefiahrlgliplqsmdieqleysrdcfcedhcdkcsvvltl
qafgesesttnvyskdlvivsnlmgrnighpiiqdkegngvlicklrkgqelkltcvakk
giakehakwgp

Timeline for d2nvqc2:

• d2nvqc2 first appeared in SCOP 1.73
  
• d2nvqc2 appears in SCOPe 2.01
  
• d2nvqc2 appears in SCOPe 2.03
  
• d2nvqc2 appears in the current release, SCOPe 2.08