SCOPe 2.08: Domain d2nvmb_: 2nvm B:

Lineage for d2nvmb_ (2nvm B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.326: XisI-like [143846] (1 superfamily)
   alpha-beta(4)-alpha-beta-alpha; 2 layers, a/b; antiparallel beta-sheet, order 1234, meander; the open side of beta-sheet provides dimerization interface

4. Superfamily d.326.1: XisI-like [143847] (2 families)

5. Family d.326.1.1: XisI-like [143848] (3 proteins)
   Pfam PF08869

6. Protein XisI [143851] (1 species)
   the fdxN element excision controlling factor

7. Species Anabaena variabilis [TaxId:1172] [143852] (1 PDB entry)
   Uniprot Q3MD55 2-118
   Ava1458

8. Domain d2nvmb_: 2nvm B: [138632]
   automated match to d2nvma1

Details for d2nvmb_

PDB Entry: 2nvm, 2.19 Å

PDB Description: crystal structure of fdxn element excision controlling factor xisi (yp_321976.1) from anabaena variabilis atcc 29413 at 2.19 a resolution

PDB Compounds: (B:) FdxN element excision controlling factor XisI

SCOPe Domain Sequences for d2nvmb_:

Sequence, based on SEQRES records:

>d2nvmb_ d.326.1.1 (B:) XisI {Anabaena variabilis [TaxId: 1172]}
dklthyrhtiqeiikkyydlsnsqpatatetkisddlpdtvgdrliideqrdqylwlccg
wdgkkrvqhiilylqiqngkiwieedstnlaivdemlvagipqtdiilgfhhpskrglte
faia

Sequence, based on observed residues (ATOM records):

>d2nvmb_ d.326.1.1 (B:) XisI {Anabaena variabilis [TaxId: 1172]}
dklthyrhtiqeiikkyydlsnslpdtvgdrliideqrdqylwlccgwdgkkrvqhiily
lqiqngkiwieedstnlaivdemlvagipqtdiilgfhhpskrgltefaia

Timeline for d2nvmb_:

• d2nvmb_ first appeared in SCOP 1.73, called d2nvmb1
  
• d2nvmb_ appears in SCOPe 2.07