SCOPe 2.08: Domain d2nuna_: 2nun A:

Lineage for d2nuna_ (2nun A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.45: Antivirulence factor [103382] (1 superfamily)
   contains a helical bundle with a buried helix and an alpha+beta insert domain

4. Superfamily e.45.1: Antivirulence factor [103383] (1 family)
   automatically mapped to Pfam PF05394

5. Family e.45.1.1: Antivirulence factor [103384] (1 protein)

6. Protein Type III effector AvrB [103385] (1 species)

7. Species Pseudomonas syringae [TaxId:317] [103386] (3 PDB entries)

8. Domain d2nuna_: 2nun A: [138610]
   automated match to d1nh1a_
   complexed with adp, trs

Details for d2nuna_

PDB Entry: 2nun, 2.4 Å

PDB Description: The structure of the type III effector AvrB complexed with ADP

PDB Compounds: (A:) Avirulence B protein

SCOPe Domain Sequences for d2nuna_:

Sequence, based on SEQRES records:

>d2nuna_ e.45.1.1 (A:) Type III effector AvrB {Pseudomonas syringae [TaxId: 317]}
tsfneasrtsfralpgpsqrqlevydqcligaarwpddssksntpenraycqsmynsirs
agdeisrggitsfeelwgratewrlsklqrgeplysafasertsdtdavtplvkpyksvl
arvvdhedahdeimqdnlfgdlnvkvyrqtaylhgnviplntfrvatdteylrdrvahlr
telgakalkqhlqrynpdridhtnasylpiikdhlndlyrqaissdlsqaelisliarth
wwaasampdqrgsaakaefaaraiasahgielppfrngnvsdieamlsgeeefvekyrsl
ldsd

Sequence, based on observed residues (ATOM records):

>d2nuna_ e.45.1.1 (A:) Type III effector AvrB {Pseudomonas syringae [TaxId: 317]}
tsfneasrtsfralpgpsqrqlevydqcligaarwpddsntpenraycqsmynsirsagd
eisrggitsfeelwgratewrlsklqrgeplysafasertsdtdavtplvkpyksvlarv
vdhedahdeimqdnlfgdlnvkvyrqtaylhgnviplntfrvatdteylrdrvahlrtel
gakalkqhlqrynpdridhtnasylpiikdhlndlyrqaissdlsqaelisliarthwwa
asampdqrgsaakaefaaraiasahgielppfrngnvsdieamlsgeeefvekyrsllds
d

Timeline for d2nuna_:

• d2nuna_ first appeared in SCOP 1.73, called d2nuna1
  
• d2nuna_ appears in SCOPe 2.07