SCOPe 2.08: Domain d2npfb5: 2npf B:726-842

Lineage for d2npfb5 (2npf B:726-842)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.11: EF-G C-terminal domain-like [54980] (4 families)

5. Family d.58.11.1: EF-G/eEF-2 domains III and V [54981] (5 proteins)
   domain III structure is lacking some of the superfamily characters and is often disordered in crystals

6. Protein Elongation factor 2 (eEF-2), C-terminal domain [419043] (2 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [419528] (13 PDB entries)
   Uniprot P32324

8. Domain d2npfb5: 2npf B:726-842 [138441]
   Other proteins in same PDB: d2npfa1, d2npfa2, d2npfa3, d2npfa4, d2npfb1, d2npfb2, d2npfb3, d2npfb4
   automated match to d1n0ua5
   complexed with gdp, mou
   has additional insertions and/or extensions that are not grouped together

Details for d2npfb5

PDB Entry: 2npf, 2.9 Å

PDB Description: structure of eef2 in complex with moriniafungin

PDB Compounds: (B:) Elongation factor 2

SCOPe Domain Sequences for d2npfb5:

Sequence, based on SEQRES records:

>d2npfb5 d.58.11.1 (B:726-842) Elongation factor 2 (eEF-2), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
epvflveiqcpeqavggiysvlnkkrgqvvseeqrpgtplftvkaylpvnesfgftgelr
qatggqafpqmvfdhwstlgsdpldptskageivlaarkrhgmkeevpgwqeyydkl

Sequence, based on observed residues (ATOM records):

>d2npfb5 d.58.11.1 (B:726-842) Elongation factor 2 (eEF-2), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
epvflveiqcpeqavggiysvlnkkrgqvvseeqplftvkaylpvnesfgftgelrqatg
gqafpqmvfdhwstlgsdpldptskageivlaarkrhgmkeevpgwqeyydkl

Timeline for d2npfb5:

• d2npfb5 first appeared in SCOP 1.73
  
• d2npfb5 appears in SCOPe 2.07