Lineage for d2jffa2 (2jff A:298-437)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 703774Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the rest
  4. 703775Superfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (2 families) (S)
  5. 703776Family c.59.1.1: MurCDEF C-terminal domain [53245] (4 proteins)
  6. 703793Protein UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53246] (1 species)
  7. 703794Species Escherichia coli [TaxId:562] [53247] (9 PDB entries)
  8. 703799Domain d2jffa2: 2jff A:298-437 [138304]
    Other proteins in same PDB: d2jffa1, d2jffa3
    automatically matched to d1e0da2
    complexed with lk2, so4

Details for d2jffa2

PDB Entry: 2jff (more details), 1.89 Å

PDB Description: crystal structure of murd ligase in complex with d-glu containing sulfonamide inhibitor
PDB Compounds: (A:) udp-n-acetylmuramoylalanine--d-glutamate ligase

SCOP Domain Sequences for d2jffa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2jffa2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
glphrfevvlehngvrwindskatnvgsteaalnglhvdgtlhlllggdgksadfsplar
ylngdnvrlycfgrdgaqlaalrpevaeqtetmeqamrllaprvqpgdmvllspacasld
qfknfeqrgnefarlakelg

SCOP Domain Coordinates for d2jffa2:

Click to download the PDB-style file with coordinates for d2jffa2.
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Timeline for d2jffa2: