Lineage for d2jbka2 (2jbk A:118-350)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097883Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 2098022Superfamily c.8.4: PA domain [52025] (1 family) (S)
  5. 2098023Family c.8.4.1: PA domain [52026] (2 protein domains)
  6. 2098024Protein Glutamate carboxypeptidase II [141984] (1 species)
  7. 2098025Species Human (Homo sapiens) [TaxId:9606] [141985] (24 PDB entries)
    Uniprot Q04609 118-350
  8. 2098048Domain d2jbka2: 2jbk A:118-350 [138254]
    Other proteins in same PDB: d2jbka1, d2jbka3
    automated match to d2c6ca2
    complexed with ca, cl, nag, qus, zn

Details for d2jbka2

PDB Entry: 2jbk (more details), 2.99 Å

PDB Description: membrane-bound glutamate carboxypeptidase ii (gcpii) in complex with quisqualic acid (quisqualate, alpha-amino-3,5-dioxo-1,2,4-oxadiazolidine-2-propanoic acid)
PDB Compounds: (A:) glutamate carboxypeptidase 2

SCOPe Domain Sequences for d2jbka2:

Sequence, based on SEQRES records: (download)

>d2jbka2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
sypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyv
nyartedffklerdmkincsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfap
gvksypdgwnlpgggvqrgnilnlngagdpltpgypaneyayrrgiaeavglpsipvhpi
gyydaqkllekmggsappdsswrgslkvpynvgpgftgnfstqkvkmhihstn

Sequence, based on observed residues (ATOM records): (download)

>d2jbka2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
sypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyv
nyartedffklerdmkincsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfap
gvksypdgwnlpgggvqrgnilnlngagdpltpgypaneyayrrgiaeavglpsipvhpi
gyydaqkllekmggsappdsswrgslkvpynvgpgftfstqkvkmhihstn

SCOPe Domain Coordinates for d2jbka2:

Click to download the PDB-style file with coordinates for d2jbka2.
(The format of our PDB-style files is described here.)

Timeline for d2jbka2: