Lineage for d2jbja2 (2jbj A:118-350)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097883Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 2098022Superfamily c.8.4: PA domain [52025] (1 family) (S)
  5. 2098023Family c.8.4.1: PA domain [52026] (2 protein domains)
  6. 2098024Protein Glutamate carboxypeptidase II [141984] (1 species)
  7. 2098025Species Human (Homo sapiens) [TaxId:9606] [141985] (24 PDB entries)
    Uniprot Q04609 118-350
  8. 2098041Domain d2jbja2: 2jbj A:118-350 [138251]
    Other proteins in same PDB: d2jbja1, d2jbja3
    automated match to d2c6ca2
    complexed with ca, cl, g88, nag, zn

Details for d2jbja2

PDB Entry: 2jbj (more details), 2.19 Å

PDB Description: membrane-bound glutamate carboxypeptidase ii (gcpii) in complex with 2-pmpa (2-phosphonomethyl-pentanedioic acid)
PDB Compounds: (A:) glutamate carboxypeptidase 2

SCOPe Domain Sequences for d2jbja2:

Sequence, based on SEQRES records: (download)

>d2jbja2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
sypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyv
nyartedffklerdmkincsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfap
gvksypdgwnlpgggvqrgnilnlngagdpltpgypaneyayrrgiaeavglpsipvhpi
gyydaqkllekmggsappdsswrgslkvpynvgpgftgnfstqkvkmhihstn

Sequence, based on observed residues (ATOM records): (download)

>d2jbja2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
sypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyv
nyartedffklerdmkincsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfap
gvksypdgwnlpgggvqrgnilnlngagdpltpgypaneyayrrgiaeavglpsipvhpi
gyydaqkllekmggsappdsswrgslkvpynvgpgftfstqkvkmhihstn

SCOPe Domain Coordinates for d2jbja2:

Click to download the PDB-style file with coordinates for d2jbja2.
(The format of our PDB-style files is described here.)

Timeline for d2jbja2: