SCOPe 2.08: Domain d2jaaa1: 2jaa A:128-320

Lineage for d2jaaa1 (2jaa A:128-320)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.250: IpaD-like [140692] (1 superfamily)
   6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest

4. Superfamily a.250.1: IpaD-like [140693] (2 families)

5. Family a.250.1.1: IpaD-like [140694] (3 proteins)
   Pfam PF06511

6. Protein Invasin IpaD [140695] (1 species)

7. Species Shigella flexneri [TaxId:623] [140696] (3 PDB entries)
   Uniprot P18013 128-320! Uniprot P18013 144-314! Uniprot P18013 39-322

8. Domain d2jaaa1: 2jaa A:128-320 [138238]
   Other proteins in same PDB: d2jaab_
   truncated, lacks two N-terminal helices

Details for d2jaaa1

PDB Entry: 2jaa, 3.1 Å

PDB Description: semet substituted shigella flexneri ipad

PDB Compounds: (A:) invasin ipad

SCOPe Domain Sequences for d2jaaa1:

Sequence, based on SEQRES records:

>d2jaaa1 a.250.1.1 (A:128-320) Invasin IpaD {Shigella flexneri [TaxId: 623]}
mishrelwakiansindineqylkvyehavssytqmyqdfsavlsslagwispggndgns
vklqvnslkkaleelkekykdkplypanntvsqeqankwltelggtigkvsqknggyvvs
inmtpidnmlksldnlggngevvldnakyqawnagfsaedetmknnlqtlvqkysnansi
fdnlvkvlsstis

Sequence, based on observed residues (ATOM records):

>d2jaaa1 a.250.1.1 (A:128-320) Invasin IpaD {Shigella flexneri [TaxId: 623]}
mishrelwakiansindineqylkvyehavssytqmyqdfsavlsslagwvnslkkalee
lkekykdkplypanntvsqeqankwltelggtigkvsqknggyvvsinmtpidnmlksln
akyqawnagfsaedetmknnlqtlvqkysnansifdnlvkvlsstis

Timeline for d2jaaa1:

• d2jaaa1 first appeared in SCOP 1.73
  
• d2jaaa1 appears in SCOPe 2.07