SCOPe 2.05: Domain d2ja7s2: 2ja7 S:1-80

Lineage for d2ja7s2 (2ja7 S:1-80)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.230: Dodecin subunit-like [88797] (6 superfamilies)
   beta-alpha-beta(2); 2 layers: alpha/beta; antiparallel beta-sheet: order 132

4. Superfamily d.230.1: N-terminal, heterodimerisation domain of RBP7 (RpoE) [88798] (1 family)
   automatically mapped to Pfam PF03876

5. Family d.230.1.1: N-terminal, heterodimerisation domain of RBP7 (RpoE) [88799] (1 protein)

6. Protein N-terminal, heterodimerisation domain of RBP7 (RpoE) [88800] (3 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [117777] (6 PDB entries)
   Uniprot P34087

8. Domain d2ja7s2: 2ja7 S:1-80 [138215]
   Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
   automatically matched to d1y14b2
   protein/DNA complex; protein/RNA complex; complexed with mg, zn

Details for d2ja7s2

PDB Entry: 2ja7, 3.8 Å

PDB Description: cpd lesion containing rna polymerase ii elongation complex c

PDB Compounds: (S:) DNA-directed RNA polymerase II 19kda polypeptide

SCOPe Domain Sequences for d2ja7s2:

Sequence; same for both SEQRES and ATOM records:

>d2ja7s2 d.230.1.1 (S:1-80) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mffikdlslnitlhpsffgprmkqylktklleevegsctgkfgyilcvldydnidiqrgr
ilptdgsaefnvkyravvfk

Timeline for d2ja7s2:

• d2ja7s2 first appeared in SCOP 1.73
  
• d2ja7s2 appears in SCOPe 2.04
  
• d2ja7s2 appears in SCOPe 2.06
  
• d2ja7s2 appears in the current release, SCOPe 2.08