Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.2: RNA-polymerase beta-prime [64490] (4 proteins) |
Protein RBP1 [64486] (2 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64487] (24 PDB entries) Uniprot P04050; part of multichain biological unit |
Domain d2ja7a1: 2ja7 A:2-1450 [138190] Other proteins in same PDB: d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1 automatically matched to d1i50a_ protein/DNA complex; protein/RNA complex; complexed with mg, zn |
PDB Entry: 2ja7 (more details), 3.8 Å
SCOPe Domain Sequences for d2ja7a1:
Sequence, based on SEQRES records: (download)
>d2ja7a1 e.29.1.2 (A:2-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl ntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaieht tlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraa mndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlk kientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpg idptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggl tsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgaf dvmideesl
>d2ja7a1 e.29.1.2 (A:2-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppv rpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdn diagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgv pksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiql qygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgde mnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqv lnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngml iidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgi gdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflnear dkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlph fskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkale dimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdh tldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqn aqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrl atrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvts gvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydp dprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfv iwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsp tgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevyn viasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeaga saelddcrgvsenvilgqmapigtgafdvmideesl
Timeline for d2ja7a1:
View in 3D Domains from other chains: (mouse over for more information) d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1 |