SCOPe 2.02: Domain d2ja6c1: 2ja6 C:3-37,C:173-268

Lineage for d2ja6c1 (2ja6 C:3-37,C:173-268)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.74: DCoH-like [55247] (5 superfamilies)
   beta(2)-alpha-beta(2)-alpha; 2 layers, alpha/beta

4. Superfamily d.74.3: RBP11-like subunits of RNA polymerase [55257] (2 families)
   form homo and heterodimers

5. Family d.74.3.1: RNA polymerase alpha subunit dimerisation domain [55258] (2 proteins)

6. Protein RPB3 [64315] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64316] (24 PDB entries)
   Uniprot P16370; part of multichain biological unit

8. Domain d2ja6c1: 2ja6 C:3-37,C:173-268 [138176]
   Other proteins in same PDB: d2ja6a1, d2ja6b1, d2ja6c2, d2ja6d1, d2ja6e1, d2ja6e2, d2ja6f1, d2ja6g1, d2ja6g2, d2ja6h1, d2ja6i1, d2ja6i2, d2ja6j1, d2ja6k1, d2ja6l1
   automatically matched to d1i3qc1
   protein/DNA complex; protein/RNA complex; complexed with mg, zn

Details for d2ja6c1

PDB Entry: 2ja6, 4 Å

PDB Description: cpd lesion containing rna polymerase ii elongation complex b

PDB Compounds: (C:) DNA-directed RNA polymerase II 45kda polypeptide

SCOPe Domain Sequences for d2ja6c1:

Sequence; same for both SEQRES and ATOM records:

>d2ja6c1 d.74.3.1 (C:3-37,C:173-268) RPB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
eegpqvkireaskdnvdfilsnvdlamanslrrvmXaaaiefeydpwnklkhtdywyeqd
sakewpqsknceyedppnegdpfdykaqadtfymnvesvgsipvdqvvvrgidtlqkkva
sillaltqmdqd

Timeline for d2ja6c1:

• d2ja6c1 first appeared in SCOP 1.73
  
• d2ja6c1 appears in SCOPe 2.01
  
• d2ja6c1 appears in SCOPe 2.03
  
• d2ja6c1 appears in the current release, SCOPe 2.08