![]() | Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds) |
![]() | Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
![]() | Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families) ![]() The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
![]() | Family e.29.1.2: RNA-polymerase beta-prime [64490] (4 proteins) |
![]() | Protein RBP1 [64486] (2 species) |
![]() | Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64487] (24 PDB entries) Uniprot P04050; part of multichain biological unit |
![]() | Domain d2ja5a1: 2ja5 A:2-1450 [138158] Other proteins in same PDB: d2ja5b1, d2ja5c1, d2ja5c2, d2ja5d1, d2ja5e1, d2ja5e2, d2ja5f1, d2ja5g1, d2ja5g2, d2ja5h1, d2ja5i1, d2ja5i2, d2ja5j1, d2ja5k1, d2ja5l1 automatically matched to d1i50a_ protein/DNA complex; protein/RNA complex; complexed with mg, zn |
PDB Entry: 2ja5 (more details), 3.8 Å
SCOPe Domain Sequences for d2ja5a1:
Sequence, based on SEQRES records: (download)
>d2ja5a1 e.29.1.2 (A:2-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdratgdadepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpv ppppvrpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhva tymdndiagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnlel dqvgvpksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskra gdiqlqygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynad fdgdemnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfi eldqvlnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspk dngmliidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhng fstgigdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrf lneardkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvd rtlphfskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrl vkaledimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdl lntdhtldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnir riiqnaqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccl lrsrlatrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtl ntfhfagvaskkvtsgvprlkeilnvaknmktpsltvylepghaadqeqaklirsaieht tlksvtiaseiyydpdprstvipedeeiiqlhfslldeeaeqsfdqqspwllrleldraa mndkdltmgqvgerikqtfkndlfviwsedndekliircrvvrpksldaeteaeedhmlk kientmlenitlrgveniervvmmkydrkvpsptgeyvkepewvletdgvnlsevmtvpg idptriytnsfidimevlgieagraalykevynviasdgsyvnyrhmallvdvmttqggl tsvtrhgfnrsntgalmrcsfeetveilfeagasaelddcrgvsenvilgqmapigtgaf dvmideesl
>d2ja5a1 e.29.1.2 (A:2-1450) RBP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} vgqqyssaplrtvkevqfglfspeevraisvakirfpetmdetqtrakigglndprlgsi drnlkcqtcqegmnecpghfghidlakpvfhvgfiakikkvcecvcmhcgkllldehnel mrqalaikdskkrfaaiwtlcktkmvcetdvpseddptqlvsrggcgntqptirkdglkl vgswkkdrdepelrvlsteeilnifkhisvkdftslgfnevfsrpewmiltclpvppppv rpsisfnesqrgeddltfkladilkanisletlehngaphhaieeaesllqfhvatymdn diagqpqalqksgrpvksirarlkgkegrirgnlmgkrvdfsartvisgdpnleldqvgv pksiaktltypevvtpynidrltqlvrngpnehpgakyvirdsgdridlryskragdiql qygwkverhimdndpvlfnrqpslhkmsmmahrvkvipystfrlnlsvtspynadfdgde mnlhvpqseetraelsqlcavplqivspqsnkpcmgivqdtlcgirkltlrdtfieldqv lnmlywvpdwdgviptpaiikpkplwsgkqilsvaipngihlqrfdegttllspkdngml iidgqiifgvvekktvgssngglihvvtrekgpqvcaklfgniqkvvnfwllhngfstgi gdtiadgptmreitetiaeakkkvldvtkeaqanlltakhgmtlresfednvvrflnear dkagrlaevnlkdlnnvkqmvmagskgsfiniaqmsacvgqqsvegkriafgfvdrtlph fskddyspeskgfvensylrgltpqefffhamggreglidtavktaetgyiqrrlvkale dimvhydnttrnslgnviqfiygedgmdaahiekqsldtiggsdaafekryrvdllntdh tldpsllesgseilgdlklqvlldeeykqlvkdrkflrevfvdgeanwplpvnirriiqn aqqtfhidhtkpsdltikdivlgvkdlqenllvlrgkneiiqnaqrdavtlfccllrsrl atrrvlqeyrltkqafdwvlsnieaqflrsvvhpgemvgvlaaqsigepatqmtlkkvts gvprlkeilnvaknmktpsltvylepghaadqeqaklirsaiehttlksvtiaseiyydp dprstvipedeeiiqlhfslqqspwllrleldraamndkdltmgqvgerikqtfkndlfv iwsedndekliircrvvrpaeedhmlkkientmlenitlrgveniervvmmkydrkvpsp tgeyvkepewvletdgvnlsevmtvpgidptriytnsfidimevlgieagraalykevyn viasdgsyvnyrhmallvdvmttqggltsvtrhgfnrsntgalmrcsfeetveilfeaga saelddcrgvsenvilgqmapigtgafdvmideesl
Timeline for d2ja5a1: