Lineage for d2j8ib2 (2j8i B:2-98)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813492Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2813805Superfamily b.80.8: Pentapeptide repeat-like [141571] (2 families) (S)
    superhelix turns are made of four short strands each; duplication: the sequence pentapeptide repeats correspond to individual strands
  5. 2813806Family b.80.8.1: Pentapeptide repeats [141572] (4 proteins)
    Pfam PF00805 (covers eight repeats or two full superhelical turns)
    this is a repeat family; one repeat unit is 2bm4 A:81-101 found in domain
  6. 2813814Protein NP275-NP276 [141575] (1 species)
    Two consecuitive ORFs in the same frame that maintain the sequence periodicity; probable single ORF disrupted by the nonsense mutation
  7. 2813815Species Nostoc punctiforme [TaxId:272131] [141576] (2 PDB entries)
  8. 2813818Domain d2j8ib2: 2j8i B:2-98 [138140]
    Other proteins in same PDB: d2j8ia2, d2j8ib3
    automated match to d2j8ia1
    complexed with cl

    applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d2j8ib2

PDB Entry: 2j8i (more details), 2.1 Å

PDB Description: structure of np275, a pentapeptide repeat protein from nostoc punctiforme
PDB Compounds: (B:) np275

SCOPe Domain Sequences for d2j8ib2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2j8ib2 b.80.8.1 (B:2-98) NP275-NP276 {Nostoc punctiforme [TaxId: 272131]}

SCOPe Domain Coordinates for d2j8ib2:

Click to download the PDB-style file with coordinates for d2j8ib2.
(The format of our PDB-style files is described here.)

Timeline for d2j8ib2:

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