Lineage for d2j88l2 (2j88 L:109-205)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2023413Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)
  7. 2023645Species Mouse (Mus musculus) [TaxId:10090] [88567] (355 PDB entries)
    Uniprot P01837# KAC_MOUSE Ig kappa chain C region; 99% sequence identity ! SQ NA # natural chimera; best hits are: Uniprot P01637 (Ig kappa chain V-V region T1) and Uniprot P01837 (Ig kappa chain C region) ! Uniprot P01837 # KAC_MOUSE Ig kappa chain C region ! Uniprot P01837 # KAC_MOUSE (P01837) Ig kappa chain C region ! SQ NA # part of Fab 28 against HIV-1 RT ! Uniprot P01837 # ! KAC_MOUSE Ig kappa chain C region
  8. 2023967Domain d2j88l2: 2j88 L:109-205 [138138]
    Other proteins in same PDB: d2j88a_, d2j88h1, d2j88l1
    automatically matched to d1a0ql2

Details for d2j88l2

PDB Entry: 2j88 (more details), 2.6 Å

PDB Description: Hyaluronidase in complex with a monoclonal IgG Fab fragment
PDB Compounds: (L:) fab

SCOPe Domain Sequences for d2j88l2:

Sequence, based on SEQRES records: (download)

>d2j88l2 b.1.1.2 (L:109-205) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
adaaptvsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqds
kdstysmsstltltkdeyerhnsytceathktstspi

Sequence, based on observed residues (ATOM records): (download)

>d2j88l2 b.1.1.2 (L:109-205) Immunoglobulin light chain kappa constant domain, CL-kappa {Mouse (Mus musculus) [TaxId: 10090]}
adaaptvsifvvcflnnfypkdinvkwkgvlnswtdqddstysmsstltltkdeytceat
hktstspi

SCOPe Domain Coordinates for d2j88l2:

Click to download the PDB-style file with coordinates for d2j88l2.
(The format of our PDB-style files is described here.)

Timeline for d2j88l2:

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Domains from same chain:
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d2j88l1