SCOPe 2.02: Domain d2j7qd_: 2j7q D:

Lineage for d2j7qd_ (2j7q D:)

1. Root: SCOPe 2.02

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (4 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (101 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d2j7qd_: 2j7q D: [138128]
   Other proteins in same PDB: d2j7qa1, d2j7qc1
   automated match to d1aara_
   complexed with gol, gve, mg, pg4

Details for d2j7qd_

PDB Entry: 2j7q, 1.8 Å

PDB Description: crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument protein m48 in complex with a ubquitin-based suicide substrate

PDB Compounds: (D:) Ubiquitin

SCOPe Domain Sequences for d2j7qd_:

Sequence; same for both SEQRES and ATOM records:

>d2j7qd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

Timeline for d2j7qd_:

• d2j7qd_ first appeared in SCOP 1.73, called d2j7qd1
  
• d2j7qd_ appears in SCOPe 2.01
  
• d2j7qd_ appears in SCOPe 2.03
  
• d2j7qd_ appears in the current release, SCOPe 2.08