SCOPe 2.04: Domain d2j28m1: 2j28 M:1-136

Lineage for d2j28m1 (2j28 M:1-136)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
   core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids

4. Superfamily d.41.4: Ribosomal protein L16p/L10e [54686] (2 families)

5. Family d.41.4.2: Ribosomal protein L16p [117888] (1 protein)
   Pfam PF00252

6. Protein Ribosomal protein L16p [117889] (4 species)

7. Species Escherichia coli [TaxId:562] [143200] (29 PDB entries)
   Uniprot P0ADY7 1-136

8. Domain d2j28m1: 2j28 M:1-136 [137965]
   Other proteins in same PDB: d2j2801, d2j2811, d2j2821, d2j2831, d2j2841, d2j28c1, d2j28c2, d2j28d1, d2j28e1, d2j28f1, d2j28g1, d2j28g2, d2j28h1, d2j28h2, d2j28i1, d2j28i2, d2j28j1, d2j28k1, d2j28l1, d2j28n1, d2j28o1, d2j28p1, d2j28q1, d2j28r1, d2j28s1, d2j28t1, d2j28u1, d2j28v1, d2j28w1, d2j28x1, d2j28y1, d2j28z1
   automatically matched to 2AW4 M:1-136
   protein/RNA complex; complexed with mg

Details for d2j28m1

PDB Entry: 2j28, 8 Å

PDB Description: model of e. coli srp bound to 70s rncs

PDB Compounds: (M:) 50S ribosomal protein L16

SCOPe Domain Sequences for d2j28m1:

Sequence; same for both SEQRES and ATOM records:

>d2j28m1 d.41.4.2 (M:1-136) Ribosomal protein L16p {Escherichia coli [TaxId: 562]}
mlqpkrtkfrkmhkgrnrglaqgtdvsfgsfglkavgrgrltarqieaarramtravkrq
gkiwirvfpdkpitekplavrmgkgkgnveywvaliqpgkvlyemdgvpeelareafkla
aaklpikttfvtktvm

Timeline for d2j28m1:

• d2j28m1 first appeared in SCOP 1.73
  
• d2j28m1 appears in SCOPe 2.03
  
• d2j28m1 appears in SCOPe 2.05
  
• d2j28m1 appears in the current release, SCOPe 2.08