Lineage for d2ispa1 (2isp A:10-91)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2324209Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 2324612Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 2324613Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)
  6. 2324614Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
    topologically similar to the second domain
  7. 2324615Species Human (Homo sapiens) [TaxId:9606] [47805] (145 PDB entries)
    Uniprot P06746
  8. 2324637Domain d2ispa1: 2isp A:10-91 [137609]
    Other proteins in same PDB: d2ispa2, d2ispa3
    automated match to d1tv9a1
    protein/DNA complex; complexed with cl, ggh, mg, na

Details for d2ispa1

PDB Entry: 2isp (more details), 2.2 Å

PDB Description: Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-methylene triphosphate
PDB Compounds: (A:) Polymerase (DNA directed), beta

SCOPe Domain Sequences for d2ispa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ispa1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d2ispa1:

Click to download the PDB-style file with coordinates for d2ispa1.
(The format of our PDB-style files is described here.)

Timeline for d2ispa1: