SCOPe 2.08: Domain d2irva_: 2irv A:

Lineage for d2irva_ (2irv A:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.51: Rhomboid-like [144090] (1 superfamily)
   6 transmembrane helices

4. Superfamily f.51.1: Rhomboid-like [144091] (2 families)

5. Family f.51.1.1: Rhomboid-like [144092] (3 proteins)
   Pfam PF01694; transmembrane serine protease

6. Protein GlpG [144095] (1 species)

7. Species Escherichia coli [TaxId:562] [144096] (19 PDB entries)
   Uniprot P09391 91-272

8. Domain d2irva_: 2irv A: [137591]
   automated match to d2ic8a1
   complexed with lda, lmt, pgv, po4

Details for d2irva_

PDB Entry: 2irv, 2.3 Å

PDB Description: Crystal structure of GlpG, a rhomboid intramembrane serine protease

PDB Compounds: (A:) Protein glpG

SCOPe Domain Sequences for d2irva_:

Sequence, based on SEQRES records:

>d2irva_ f.51.1.1 (A:) GlpG {Escherichia coli [TaxId: 562]}
ragpvtwvmmiacvvvfiamqilgdqevmlwlawpfdptlkfefwryfthalmhfslmhi
lfnllwwwylggavekrlgsgklivitlisallsgyvqqkfsgpwfgglsgvvyalmgyv
wlrgerdpqsgiylqrgliifaliwivagwfdlfgmsmangahiaglavglamafvdsln
ar

Sequence, based on observed residues (ATOM records):

>d2irva_ f.51.1.1 (A:) GlpG {Escherichia coli [TaxId: 562]}
ragpvtwvmmiacvvvfiamqilgdqevmlwlawpfdptlkfefwryfthalmhfslmhi
lfnllwwwylggavekrlgsgklivitlisallsgyvqqkfsgpwfgglsgvvyalmgyv
wlrgerdpqsgiylqrgliifaliwivagwfdangahiaglavglamafvdslnar

Timeline for d2irva_:

• d2irva_ first appeared in SCOP 1.73, called d2irva1
  
• d2irva_ appears in SCOPe 2.07