Lineage for d2ipka2 (2ipk A:13-81)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2163004Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
  4. 2163005Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2163006Family d.19.1.1: MHC antigen-recognition domain [54453] (13 protein domains)
  6. 2163613Protein Class II MHC alpha chain, N-terminal domain [88806] (15 species)
  7. 2163706Species Mouse (Mus musculus), I-AU [TaxId:10090] [89859] (13 PDB entries)
  8. 2163708Domain d2ipka2: 2ipk A:13-81 [137578]
    Other proteins in same PDB: d2ipka1, d2ipkb1, d2ipkb2, d2ipkd1, d2ipkd2
    automatically matched to d1k2da2

Details for d2ipka2

PDB Entry: 2ipk (more details), 2.3 Å

PDB Description: crystal structure of the mhc class ii molecule hla-dr1 in complex with the fluorogenic peptide, acpkxvkqntlklat (x=3-[5-(dimethylamino)-1,3-dioxo-1,3-dihydro-2h-isoindol-2-yl]-l-alanine) and the superantigen, sec3 variant 3b2
PDB Compounds: (A:) hla class II histocompatibility antigen, dr alpha chain

SCOPe Domain Sequences for d2ipka2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ipka2 d.19.1.1 (A:13-81) Class II MHC alpha chain, N-terminal domain {Mouse (Mus musculus), I-AU [TaxId: 10090]}

SCOPe Domain Coordinates for d2ipka2:

Click to download the PDB-style file with coordinates for d2ipka2.
(The format of our PDB-style files is described here.)

Timeline for d2ipka2: