SCOPe 2.08: Domain d2ilxa2: 2ilx A:5-219

Lineage for d2ilxa2 (2ilx A:5-219)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.61: LigT-like [55143] (1 superfamily)
   duplication of beta-alpha-beta-alpha-beta motif: antiparallel beta sheet forms barrel (n=6, S=8) similar to the barrel of prokaryotic DNA topoisomerases I and III

4. Superfamily d.61.1: LigT-like [55144] (5 families)

5. Family d.61.1.3: 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103043] (2 proteins)
   automatically mapped to Pfam PF05881

6. Protein 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain [103044] (1 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [103045] (2 PDB entries)

8. Domain d2ilxa2: 2ilx A:5-219 [137499]
   Other proteins in same PDB: d2ilxa3
   automated match to d2ilxa1

Details for d2ilxa2

PDB Entry: 2ilx

PDB Description: solution structure of catalytic domain of rat 2',3'-cyclic-nucleotide 3'-phosphodiesterase (cnp) protein

PDB Compounds: (A:) 2',3'-cyclic-nucleotide 3'-phosphodiesterase

SCOPe Domain Sequences for d2ilxa2:

Sequence; same for both SEQRES and ATOM records:

>d2ilxa2 d.61.1.3 (A:5-219) 2',3'-cyclic nucleotide 3'-phosphodiesterase, catalytic domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
flplyfgwfltkkssetlrkagqvfleelgnhkafkkelrhfisgdepkekldlvsyfgk
rppgvlhcttkfcdygkatgaeeyaqqdvvrrsygkafklsisalfvtpktagaqvvlne
qelqlwpsdldkpssseslppgsrahvtlgcaadvqpvqtgldlleilqqvkggsqgeev
gelprgklyslgkgrwmlslakkmevkaiftgyyg

Timeline for d2ilxa2:

• d2ilxa2 first appeared in SCOP 1.73, called d2ilxa1
  
• d2ilxa2 appears in SCOPe 2.07