SCOPe 2.07: Domain d2idkd_: 2idk D:

Lineage for d2idkd_ (2idk D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families)

5. Family c.66.1.5: Glycine N-methyltransferase [53348] (1 protein)

6. Protein Glycine N-methyltransferase [53349] (3 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [53350] (12 PDB entries)

8. Domain d2idkd_: 2idk D: [137283]
   automated match to d1bhja_
   complexed with c2f

Details for d2idkd_

PDB Entry: 2idk, 2.55 Å

PDB Description: crystal structure of rat glycine n-methyltransferase complexed with folate

PDB Compounds: (D:) glycine n-methyltransferase

SCOPe Domain Sequences for d2idkd_:

Sequence, based on SEQRES records:

>d2idkd_ c.66.1.5 (D:) Glycine N-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

Sequence, based on observed residues (ATOM records):

>d2idkd_ c.66.1.5 (D:) Glycine N-methyltransferase {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgapgfskfrlsyyph
clasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

Timeline for d2idkd_:

• d2idkd_ first appeared in SCOP 1.73, called d2idkd1
  
• d2idkd_ appears in SCOPe 2.06
  
• d2idkd_ appears in the current release, SCOPe 2.08