SCOPe 2.06: Domain d2i91b1: 2i91 B:5-363

Lineage for d2i91b1 (2i91 B:5-363)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.25: TROVE domain-like [140864] (1 family)
   consist of two superhelical sections arranged like a horse-shoe
   automatically mapped to Pfam PF05731

5. Family a.118.25.1: TROVE domain-like [140865] (1 protein)
   Pfam PF05731

6. Protein 60-kda SS-aARo ribonucleoprotein [140866] (1 species)

7. Species African clawed frog (Xenopus laevis) [TaxId:8355] [140867] (3 PDB entries)
   Uniprot P42700 5-363

8. Domain d2i91b1: 2i91 B:5-363 [137107]
   Other proteins in same PDB: d2i91a2, d2i91b2
   automated match to d1yvpa1
   protein/RNA complex; complexed with act, mg

Details for d2i91b1

PDB Entry: 2i91, 2.65 Å

PDB Description: 60kDa Ro autoantigen in complex with a fragment of misfolded RNA

PDB Compounds: (B:) 60 kDa SS-A/Ro ribonucleoprotein

SCOPe Domain Sequences for d2i91b1:

Sequence, based on SEQRES records:

>d2i91b1 a.118.25.1 (B:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]}
mdqtqplnekqvpnsegcyvwqvsdmnrlrrflcfgseggtyyieekklgqenaeallrl
iedgkgcevvqeiktfsqegraakqeptlfalavcsqcsdiktkqaafravpevcripth
lftfiqfkkdlkegmkcgmwgralrkavsdwyntkdalnlamavtkykqrngwshkdllr
lshikpanegltmvakyvskgwkevqeaykekelspetekvlkyleatervkrtkdelei
ihlideyrlvrehlltihlkskeiwksllqdmpltallrnlgkmtadsvlapassevssv
cerltnekllkkarihpfhilvaletykkghgnrgklrwipdtsivealdnafyksfkl

Sequence, based on observed residues (ATOM records):

>d2i91b1 a.118.25.1 (B:5-363) 60-kda SS-aARo ribonucleoprotein {African clawed frog (Xenopus laevis) [TaxId: 8355]}
mdqtqplnekqvpnsegcyvwqvsdmnrlrrflcfgseggtyyieekklgqenaeallrl
iedgkgcevvqeiktfsqegraakqeptlfalavcsqcsdiktkqaafravpevcripth
lftfiqfkkdlkwgralrkavsdwyntkdalnlamavtkykqrngwshkdllrlshikpa
negltmvakyvskgwkevqeaykekelspetekvlkyleatervkrtkdeleiihlidey
rlvrehlltihlkskeiwksllqdmpltallrnlgkmtadsvlapassevssvcerltne
kllkkarihpfhilvaletykkghgnrgklrwipdtsivealdnafyksfkl

Timeline for d2i91b1:

• d2i91b1 first appeared in SCOP 1.73
  
• d2i91b1 appears in SCOPe 2.05
  
• d2i91b1 appears in SCOPe 2.07
  
• d2i91b1 appears in the current release, SCOPe 2.08