Lineage for d2hvhd1 (2hvh D:298-468)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 701284Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 701966Superfamily c.55.3: Ribonuclease H-like [53098] (12 families) (S)
    consists of one domain of this fold
  5. 702237Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (14 proteins)
    contains Pfam PF00929
  6. 702290Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF
  7. 702291Species Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId:1422] [53122] (42 PDB entries)
  8. 702337Domain d2hvhd1: 2hvh D:298-468 [136806]
    Other proteins in same PDB: d2hvha2, d2hvhd2
    automatically matched to d1l3sa1
    complexed with 6og, dct, ddg, mn, so4, suc

Details for d2hvhd1

PDB Entry: 2hvh (more details), 2.49 Å

PDB Description: ddctp:o6meg pair in the polymerase active site (0 position)
PDB Compounds: (D:) DNA polymerase I

SCOP Domain Sequences for d2hvhd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hvhd1 c.55.3.5 (D:298-468) Exonuclease domain of prokaryotic DNA polymerase {Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]}

SCOP Domain Coordinates for d2hvhd1:

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Timeline for d2hvhd1:

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