Lineage for d2hmoa2 (2hmo A:155-446)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2539012Superfamily d.129.3: Bet v1-like [55961] (11 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 2539121Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (7 proteins)
    Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1
  6. 2539153Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (5 species)
  7. 2539171Species Pseudomonas sp. [TaxId:69011] [228600] (14 PDB entries)
  8. 2539173Domain d2hmoa2: 2hmo A:155-446 [136601]
    Other proteins in same PDB: d2hmoa1, d2hmob_
    automated match to d1o7na2
    complexed with 3nt, edo, fe, fes, so4

Details for d2hmoa2

PDB Entry: 2hmo (more details), 1.6 Å

PDB Description: Crystal Structure of Naphthalene 1,2-Dioxygenase Bound to 3-Nitrotoluene.
PDB Compounds: (A:) Naphthalene 1,2-dioxygenase alpha subunit

SCOPe Domain Sequences for d2hmoa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hmoa2 d.129.3.3 (A:155-446) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Pseudomonas sp. [TaxId: 69011]}
eapplmdylgdaawylepmfkhsgglelvgppgkvvikanwkapaenfvgdayhvgwtha
sslrsgesifsslagnaalppegaglqmtskygsgmgvlwdgysgvhsadlvpelmafgg
akqerlnkeigdvrariyrshlnctvfpnnsmltcsgvfkvwnpidanttevwtyaivek
dmpedlkrrladsvqrtfgpagfwesddndnmetasqngkkyqsrdsdllsnlgfgedvy
gdavypgvvgksaigetsyrgfyrayqahvsssnwaefehasstwhteltkt

SCOPe Domain Coordinates for d2hmoa2:

Click to download the PDB-style file with coordinates for d2hmoa2.
(The format of our PDB-style files is described here.)

Timeline for d2hmoa2:

View in 3D
Domains from same chain:
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d2hmoa1
View in 3D
Domains from other chains:
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d2hmob_