Class b: All beta proteins [48724] (177 folds) |
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies) sandwich; 7 strands in 2 sheets; greek-key some members of the fold have additional strands |
Superfamily b.1.1: Immunoglobulin [48726] (5 families) |
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins) |
Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species) VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species |
Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88528] (40 PDB entries) Uniprot P04940 # KV6F_MOUSE IG KAPPA CHAIN V-VI REGION NQ2-17.4.1 |
Domain d2hlfd1: 2hlf D:1-105 [136566] Other proteins in same PDB: d2hlfa1, d2hlfb1, d2hlfd2, d2hlff2 automatically matched to d1dqdl1 complexed with br; mutant |
PDB Entry: 2hlf (more details), 3.3 Å
SCOPe Domain Sequences for d2hlfd1:
Sequence; same for both SEQRES and ATOM records: (download)
>d2hlfd1 b.1.1.1 (D:1-105) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]} divltqspaimsaapgdkvtmtcsasssvsyihwyqqksgtspkrwiydtskltsgvpvr fsgsgsgtsysltintmeaedaatyycqqwsshpqtfgggtklei
Timeline for d2hlfd1:
View in 3D Domains from other chains: (mouse over for more information) d2hlfa1, d2hlfb1, d2hlff1, d2hlff2 |