Lineage for d2hj9b1 (2hj9 B:27-364)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 710422Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 710423Superfamily c.93.1: Periplasmic binding protein-like I [53822] (1 family) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 710424Family c.93.1.1: L-arabinose binding protein-like [53823] (15 proteins)
  6. 710600Protein Quorum-sensing signal (autoinducer-2) binding protein LuxP [69622] (1 species)
  7. 710601Species Vibrio harveyi [TaxId:669] [69623] (3 PDB entries)
  8. 710605Domain d2hj9b1: 2hj9 B:27-364 [136539]
    automatically matched to d1jx6a_
    complexed with ai2

Details for d2hj9b1

PDB Entry: 2hj9 (more details), 2.34 Å

PDB Description: Crystal structure of the Autoinducer-2-bound form of Vibrio harveyi LuxP complexed with the periplasmic domain of LuxQ
PDB Compounds: (B:) Autoinducer 2-binding periplasmic protein luxP

SCOP Domain Sequences for d2hj9b1:

Sequence, based on SEQRES records: (download)

>d2hj9b1 c.93.1.1 (B:27-364) Quorum-sensing signal (autoinducer-2) binding protein LuxP {Vibrio harveyi [TaxId: 669]}
gywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsdywvrni
asfekrlyklninyqlnqvftrpnadikqqslslmealksksdyliftldttrhrkfveh
vldstntklilqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhtyysvlyf
segyisdvrgdtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdfiyacst
dvalgavdalaelgredimingwgggsaeldaiqkgdlditvmrmnddtgiamaeaikwd
ledkpvptvysgdfeivtkadsperiealkkrafrysd

Sequence, based on observed residues (ATOM records): (download)

>d2hj9b1 c.93.1.1 (B:27-364) Quorum-sensing signal (autoinducer-2) binding protein LuxP {Vibrio harveyi [TaxId: 669]}
gywgyqefldefpeqrnltnalseavraqpvplskptqrpikisvvypgqqvsdywvrni
asfekrlyklninyqlnqvftrslmealksksdyliftldttrhrkfvehvldstntkli
lqnittpvrewdkhqpflyvgfdhaegsrelatefgkffpkhtyysvlyfsegyisdvrg
dtfihqvnrdnnfelqsayytkatkqsgydaakaslakhpdvdfiyacstdvalgavdal
aelgredimingwgggsaeldaiqkgdlditvmrmnddtgiamaeaikwdledkpvptvy
sgdfeivtkadsperiealkkrafrysd

SCOP Domain Coordinates for d2hj9b1:

Click to download the PDB-style file with coordinates for d2hj9b1.
(The format of our PDB-style files is described here.)

Timeline for d2hj9b1: