Lineage for d2hd5b1 (2hd5 B:1-76)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 717080Fold d.15: beta-Grasp (ubiquitin-like) [54235] (13 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 717081Superfamily d.15.1: Ubiquitin-like [54236] (7 families) (S)
  5. 717082Family d.15.1.1: Ubiquitin-related [54237] (38 proteins)
    Pfam PF00240
  6. 717214Protein Ubiquitin [54238] (3 species)
  7. 717220Species Human (Homo sapiens) [TaxId:9606] [54239] (47 PDB entries)
    identical sequence in many other species
  8. 717231Domain d2hd5b1: 2hd5 B:1-76 [136341]
    automatically matched to d1aara_
    complexed with zn

Details for d2hd5b1

PDB Entry: 2hd5 (more details), 1.85 Å

PDB Description: usp2 in complex with ubiquitin
PDB Compounds: (B:) Polyubiquitin

SCOP Domain Sequences for d2hd5b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hd5b1 d.15.1.1 (B:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOP Domain Coordinates for d2hd5b1:

Click to download the PDB-style file with coordinates for d2hd5b1.
(The format of our PDB-style files is described here.)

Timeline for d2hd5b1: