Lineage for d2hbma2 (2hbm A:129-420)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 835945Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 836757Superfamily c.55.3: Ribonuclease H-like [53098] (14 families) (S)
    consists of one domain of this fold
  5. 837032Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (15 proteins)
    contains Pfam PF00929
  6. 837213Protein Exosome complex exonuclease RRP6 [142493] (1 species)
  7. 837214Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [142494] (4 PDB entries)
    Uniprot Q12149 129-420
  8. 837218Domain d2hbma2: 2hbm A:129-420 [136318]
    Other proteins in same PDB: d2hbma1
    automatically matched to 2HBJ A:129-420
    complexed with mn, u, zn; mutant

Details for d2hbma2

PDB Entry: 2hbm (more details), 2.7 Å

PDB Description: structure of the yeast nuclear exosome component, rrp6p, reveals an interplay between the active site and the hrdc domain; protein in complex with mn, zn, and ump
PDB Compounds: (A:) Exosome complex exonuclease RRP6

SCOP Domain Sequences for d2hbma2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hbma2 c.55.3.5 (A:129-420) Exosome complex exonuclease RRP6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOP Domain Coordinates for d2hbma2:

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Timeline for d2hbma2:

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