Lineage for d2hbla2 (2hbl A:129-420)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2883383Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2885833Superfamily c.55.3: Ribonuclease H-like [53098] (18 families) (S)
    consists of one domain of this fold
  5. 2886484Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (17 proteins)
    contains Pfam PF00929
  6. 2886805Protein Exosome complex exonuclease RRP6 [142493] (1 species)
  7. 2886806Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [142494] (4 PDB entries)
    Uniprot Q12149 129-420
  8. 2886809Domain d2hbla2: 2hbl A:129-420 [136316]
    Other proteins in same PDB: d2hbla1, d2hbla3
    automated match to d2hbja2
    protein/RNA complex; complexed with amp, mn, zn

    has additional insertions and/or extensions that are not grouped together

Details for d2hbla2

PDB Entry: 2hbl (more details), 2.3 Å

PDB Description: structure of the yeast nuclear exosome component, rrp6p, reveals an interplay between the active site and the hrdc domain; protein in complex with mn, zn, and amp
PDB Compounds: (A:) Exosome complex exonuclease RRP6

SCOPe Domain Sequences for d2hbla2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hbla2 c.55.3.5 (A:129-420) Exosome complex exonuclease RRP6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2hbla2:

Click to download the PDB-style file with coordinates for d2hbla2.
(The format of our PDB-style files is described here.)

Timeline for d2hbla2: